Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COX4I1P13073 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.4■□□□□ 0.22
COX4I1P13073 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.4■□□□□ 0.22
COX4I1P13073 MIR718-201ENST00000390190 70 ntBASIC16.4■□□□□ 0.22
COX4I1P13073 SPDYE15P-201ENST00000424157 909 ntBASIC16.4■□□□□ 0.22
COX4I1P13073 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.4■□□□□ 0.22
COX4I1P13073 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.4■□□□□ 0.22
COX4I1P13073 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COX4I1P13073 HLA-J-202ENST00000469281 1241 ntBASIC16.4■□□□□ 0.22
COX4I1P13073 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.4■□□□□ 0.22
COX4I1P13073 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 AC023824.1-201ENST00000562945 2975 ntBASIC16.4■□□□□ 0.22
COX4I1P13073 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX4I1P13073 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
COX4I1P13073 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
COX4I1P13073 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
COX4I1P13073 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
COX4I1P13073 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
COX4I1P13073 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COX4I1P13073 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.39■□□□□ 0.21
COX4I1P13073 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COX4I1P13073 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.39■□□□□ 0.21
COX4I1P13073 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 MIR662-201ENST00000384847 95 ntBASIC16.39■□□□□ 0.21
COX4I1P13073 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 AC140113.3-201ENST00000605663 199 ntBASIC16.39■□□□□ 0.21
COX4I1P13073 AL138966.2-201ENST00000621997 464 ntBASIC16.39■□□□□ 0.21
COX4I1P13073 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.39■□□□□ 0.21
COX4I1P13073 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COX4I1P13073 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.39■□□□□ 0.21
COX4I1P13073 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COX4I1P13073 KRT17P2-201ENST00000300992 1314 ntBASIC16.39■□□□□ 0.21
COX4I1P13073 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.39■□□□□ 0.21
COX4I1P13073 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COX4I1P13073 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.39■□□□□ 0.21
COX4I1P13073 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 AC009336.1-201ENST00000608941 1553 ntBASIC16.38■□□□□ 0.21
COX4I1P13073 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
COX4I1P13073 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.38■□□□□ 0.21
COX4I1P13073 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
COX4I1P13073 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
COX4I1P13073 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COX4I1P13073 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms