Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
APODP05090 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.1■□□□□ 0.33
APODP05090 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.1■□□□□ 0.33
APODP05090 AL035633.1-201ENST00000406139 838 ntBASIC17.1■□□□□ 0.33
APODP05090 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.1■□□□□ 0.33
APODP05090 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 SLC25A39P2-201ENST00000537614 270 ntBASIC17.1■□□□□ 0.33
APODP05090 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.1■□□□□ 0.33
APODP05090 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.1■□□□□ 0.33
APODP05090 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.1■□□□□ 0.33
APODP05090 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.1■□□□□ 0.33
APODP05090 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
APODP05090 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.1■□□□□ 0.33
APODP05090 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
APODP05090 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.1■□□□□ 0.33
APODP05090 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APODP05090 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
APODP05090 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
APODP05090 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.09■□□□□ 0.33
APODP05090 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.09■□□□□ 0.33
APODP05090 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.09■□□□□ 0.33
APODP05090 SPDYE14P-201ENST00000442619 822 ntBASIC17.09■□□□□ 0.33
APODP05090 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APODP05090 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.09■□□□□ 0.33
APODP05090 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.09■□□□□ 0.33
APODP05090 AC140878.1-201ENST00000565277 250 ntBASIC17.09■□□□□ 0.33
APODP05090 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.09■□□□□ 0.33
APODP05090 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
APODP05090 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.09■□□□□ 0.33
APODP05090 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
APODP05090 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
APODP05090 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 AC016027.1-202ENST00000607927 1699 ntBASIC17.09■□□□□ 0.33
APODP05090 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APODP05090 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
APODP05090 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
APODP05090 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APODP05090 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
APODP05090 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
APODP05090 NOC2LP1-202ENST00000452600 2235 ntBASIC17.08■□□□□ 0.33
APODP05090 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APODP05090 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.08■□□□□ 0.33
APODP05090 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APODP05090 AC008677.1-201ENST00000519230 1561 ntBASIC17.08■□□□□ 0.32
APODP05090 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.08■□□□□ 0.32
APODP05090 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APODP05090 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APODP05090 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APODP05090 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.08■□□□□ 0.32
APODP05090 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.08■□□□□ 0.32
APODP05090 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.08■□□□□ 0.32
APODP05090 ALG1L8P-201ENST00000533887 760 ntBASIC17.08■□□□□ 0.32
APODP05090 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.08■□□□□ 0.32
APODP05090 AP000842.3-202ENST00000569238 1080 ntBASIC17.08■□□□□ 0.32
APODP05090 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.08■□□□□ 0.32
APODP05090 CYP2A7P1-201ENST00000595391 815 ntBASIC17.08■□□□□ 0.32
APODP05090 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.08■□□□□ 0.32
APODP05090 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.08■□□□□ 0.32
APODP05090 AC021097.1-201ENST00000607902 574 ntBASIC17.08■□□□□ 0.32
APODP05090 MIR6080-201ENST00000617359 66 ntBASIC17.08■□□□□ 0.32
APODP05090 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APODP05090 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APODP05090 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.08■□□□□ 0.32
APODP05090 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APODP05090 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.08■□□□□ 0.32
APODP05090 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
APODP05090 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
APODP05090 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APODP05090 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.08■□□□□ 0.32
APODP05090 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APODP05090 GNAS-203ENST00000306120 1878 ntBASIC17.07■□□□□ 0.32
APODP05090 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.07■□□□□ 0.32
APODP05090 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
APODP05090 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
APODP05090 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APODP05090 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.07■□□□□ 0.32
APODP05090 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms