Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SIX6O95475 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.26□□□□□ -0.13
SIX6O95475 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SIX6O95475 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.26□□□□□ -0.13
SIX6O95475 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SIX6O95475 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.26□□□□□ -0.13
SIX6O95475 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 WWOX-216ENST00000569818 525 ntBASIC14.26□□□□□ -0.13
SIX6O95475 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.26□□□□□ -0.13
SIX6O95475 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.26□□□□□ -0.13
SIX6O95475 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.26□□□□□ -0.13
SIX6O95475 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 AL603832.2-201ENST00000566195 2125 ntBASIC14.26□□□□□ -0.13
SIX6O95475 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.26□□□□□ -0.13
SIX6O95475 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIX6O95475 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.25□□□□□ -0.13
SIX6O95475 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SIX6O95475 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SIX6O95475 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.25□□□□□ -0.13
SIX6O95475 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.25□□□□□ -0.13
SIX6O95475 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.25□□□□□ -0.13
SIX6O95475 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.25□□□□□ -0.13
SIX6O95475 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.25□□□□□ -0.13
SIX6O95475 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SIX6O95475 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.25□□□□□ -0.13
SIX6O95475 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.25□□□□□ -0.13
SIX6O95475 KRT18P65-201ENST00000439811 1286 ntBASIC14.25□□□□□ -0.13
SIX6O95475 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.25□□□□□ -0.13
SIX6O95475 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.25□□□□□ -0.13
SIX6O95475 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.25□□□□□ -0.13
SIX6O95475 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.25□□□□□ -0.13
SIX6O95475 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.25□□□□□ -0.13
SIX6O95475 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 ME2P1-201ENST00000426028 1970 ntBASIC14.25□□□□□ -0.13
SIX6O95475 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SIX6O95475 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SIX6O95475 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIX6O95475 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.24□□□□□ -0.13
SIX6O95475 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 AL596087.1-201ENST00000400979 1969 ntBASIC14.24□□□□□ -0.13
SIX6O95475 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SIX6O95475 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SIX6O95475 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms