Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM3O75382 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TRIM3O75382 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM3O75382 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM3O75382 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRIM3O75382 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM3O75382 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM3O75382 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.89■□□□□ 0.13
TRIM3O75382 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM3O75382 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.89■□□□□ 0.13
TRIM3O75382 AC116407.3-201ENST00000623905 1129 ntBASIC15.89■□□□□ 0.13
TRIM3O75382 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM3O75382 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM3O75382 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM3O75382 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM3O75382 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM3O75382 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM3O75382 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM3O75382 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.89■□□□□ 0.13
TRIM3O75382 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM3O75382 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM3O75382 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM3O75382 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM3O75382 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM3O75382 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM3O75382 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM3O75382 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.88■□□□□ 0.13
TRIM3O75382 AP000347.1-202ENST00000435868 847 ntBASIC15.88■□□□□ 0.13
TRIM3O75382 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM3O75382 AC105339.3-201ENST00000560043 636 ntBASIC15.88■□□□□ 0.13
TRIM3O75382 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM3O75382 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
TRIM3O75382 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 AC120114.3-201ENST00000611923 658 ntBASIC15.88■□□□□ 0.13
TRIM3O75382 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.88■□□□□ 0.13
TRIM3O75382 PCDHB19P-201ENST00000570871 2371 ntBASIC15.88■□□□□ 0.13
TRIM3O75382 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM3O75382 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM3O75382 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM3O75382 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM3O75382 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM3O75382 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM3O75382 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms