Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
LDB3O75112 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LDB3O75112 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.97■□□□□ 0.15
LDB3O75112 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.97■□□□□ 0.15
LDB3O75112 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 AC034105.1-201ENST00000563488 319 ntBASIC15.97■□□□□ 0.15
LDB3O75112 AC145285.3-201ENST00000564603 959 ntBASIC15.97■□□□□ 0.15
LDB3O75112 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LDB3O75112 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.97■□□□□ 0.15
LDB3O75112 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LDB3O75112 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LDB3O75112 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB3O75112 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
LDB3O75112 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LDB3O75112 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.96■□□□□ 0.15
LDB3O75112 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.96■□□□□ 0.15
LDB3O75112 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB3O75112 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.96■□□□□ 0.15
LDB3O75112 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB3O75112 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 OR7E47P-204ENST00000575924 449 ntBASIC15.96■□□□□ 0.15
LDB3O75112 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.96■□□□□ 0.15
LDB3O75112 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.96■□□□□ 0.15
LDB3O75112 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.96■□□□□ 0.15
LDB3O75112 AL021920.2-201ENST00000624828 1351 ntBASIC15.96■□□□□ 0.15
LDB3O75112 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LDB3O75112 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LDB3O75112 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LDB3O75112 AC106886.4-201ENST00000623557 2502 ntBASIC15.96■□□□□ 0.14
LDB3O75112 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.96■□□□□ 0.14
LDB3O75112 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
LDB3O75112 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
LDB3O75112 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LDB3O75112 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.96■□□□□ 0.14
LDB3O75112 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.96■□□□□ 0.14
LDB3O75112 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LDB3O75112 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB3O75112 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.95■□□□□ 0.14
LDB3O75112 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB3O75112 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
LDB3O75112 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB3O75112 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LDB3O75112 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LDB3O75112 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB3O75112 CRYGEP-201ENST00000412192 528 ntBASIC15.95■□□□□ 0.14
LDB3O75112 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms