Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RIPK2O43353 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RIPK2O43353 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RIPK2O43353 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RIPK2O43353 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RIPK2O43353 AL513477.1-201ENST00000602865 2407 ntBASIC17.27■□□□□ 0.36
RIPK2O43353 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.27■□□□□ 0.36
RIPK2O43353 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RIPK2O43353 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RIPK2O43353 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RIPK2O43353 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RIPK2O43353 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RIPK2O43353 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
RIPK2O43353 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RIPK2O43353 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
RIPK2O43353 AC117947.1-201ENST00000427448 529 ntBASIC17.27■□□□□ 0.36
RIPK2O43353 BX664615.1-201ENST00000443558 458 ntBASIC17.27■□□□□ 0.36
RIPK2O43353 AC112907.2-201ENST00000448639 330 ntBASIC17.27■□□□□ 0.36
RIPK2O43353 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.27■□□□□ 0.36
RIPK2O43353 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.27■□□□□ 0.36
RIPK2O43353 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
RIPK2O43353 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.27■□□□□ 0.36
RIPK2O43353 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RIPK2O43353 AD001527.2-201ENST00000622994 785 ntBASIC17.27■□□□□ 0.36
RIPK2O43353 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.27■□□□□ 0.36
RIPK2O43353 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.27■□□□□ 0.36
RIPK2O43353 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.27■□□□□ 0.36
RIPK2O43353 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RIPK2O43353 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.27■□□□□ 0.36
RIPK2O43353 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.27■□□□□ 0.35
RIPK2O43353 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.27■□□□□ 0.35
RIPK2O43353 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RIPK2O43353 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RIPK2O43353 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.27■□□□□ 0.35
RIPK2O43353 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RIPK2O43353 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RIPK2O43353 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RIPK2O43353 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.26■□□□□ 0.35
RIPK2O43353 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RIPK2O43353 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RIPK2O43353 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RIPK2O43353 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RIPK2O43353 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 AC092384.3-202ENST00000564646 2873 ntBASIC17.26■□□□□ 0.35
RIPK2O43353 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.26■□□□□ 0.35
RIPK2O43353 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 SPDYE13P-201ENST00000445314 798 ntBASIC17.26■□□□□ 0.35
RIPK2O43353 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RIPK2O43353 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.26■□□□□ 0.35
RIPK2O43353 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.26■□□□□ 0.35
RIPK2O43353 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.26■□□□□ 0.35
RIPK2O43353 AL592071.1-201ENST00000611956 408 ntBASIC17.26■□□□□ 0.35
RIPK2O43353 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.26■□□□□ 0.35
RIPK2O43353 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.26■□□□□ 0.35
RIPK2O43353 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
RIPK2O43353 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 AL596087.1-201ENST00000400979 1969 ntBASIC17.26■□□□□ 0.35
RIPK2O43353 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.26■□□□□ 0.35
RIPK2O43353 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.26■□□□□ 0.35
RIPK2O43353 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RIPK2O43353 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RIPK2O43353 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RIPK2O43353 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RIPK2O43353 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.25■□□□□ 0.35
RIPK2O43353 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.25■□□□□ 0.35
RIPK2O43353 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIPK2O43353 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms