Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.68■□□□□ 0.26
VGLL3A8MV65 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VGLL3A8MV65 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 AC126335.2-201ENST00000623362 4637 ntBASIC16.67■□□□□ 0.26
VGLL3A8MV65 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 AC019294.4-201ENST00000561777 2905 ntBASIC16.67■□□□□ 0.26
VGLL3A8MV65 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VGLL3A8MV65 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VGLL3A8MV65 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 AC073210.2-201ENST00000430369 194 ntBASIC16.66■□□□□ 0.26
VGLL3A8MV65 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 AC100791.3-201ENST00000617619 330 ntBASIC16.66■□□□□ 0.26
VGLL3A8MV65 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.66■□□□□ 0.26
VGLL3A8MV65 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VGLL3A8MV65 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VGLL3A8MV65 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms