Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 AC091304.2-201ENST00000564639 760 ntBASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 GPR89P-201ENST00000407924 1495 ntBASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
TRGV1A0A0A0MS02 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 SLC25A1P3-201ENST00000395415 828 ntBASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 AP001269.4-201ENST00000609611 512 ntBASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 NKILA-202ENST00000614771 2598 ntBASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 AC079776.2-201ENST00000641154 1609 ntBASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 AP005117.1-201ENST00000584346 1413 ntBASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRGV1A0A0A0MS02 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 AC005915.1-201ENST00000624912 2018 ntBASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRGV1A0A0A0MS02 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms