Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 MED15P5-201ENST00000423150 992 ntBASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 POLD2P1-201ENST00000511220 997 ntBASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 AC129492.6-201ENST00000611383 1305 ntBASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 AL021920.2-201ENST00000624828 1351 ntBASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 AC005915.1-201ENST00000624912 2018 ntBASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGC4Q9Y5F7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 KRT18P3-201ENST00000451602 1288 ntBASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGC4Q9Y5F7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 AL591424.1-201ENST00000442569 1213 ntBASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 FAM185BP-201ENST00000443595 716 ntBASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 CXCL1P1-201ENST00000502804 216 ntBASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 KRT18P58-201ENST00000527480 1120 ntBASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 AC018845.2-201ENST00000568326 409 ntBASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 FAM197Y3-203ENST00000618346 717 ntBASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms