Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 AL596442.2-201ENST00000610240 980 ntBASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 AC116353.5-201ENST00000638148 1699 ntBASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHB11Q9Y5F2 AC093525.9-201ENST00000624961 1746 ntBASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 AC002310.6-201ENST00000624451 1377 ntBASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 MCCD1P2-201ENST00000423228 335 ntBASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 AP006288.1-201ENST00000446065 395 ntBASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 AL353135.1-201ENST00000606729 504 ntBASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 NKILA-202ENST00000614771 2598 ntBASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 KRT18P28-201ENST00000453838 1332 ntBASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB11Q9Y5F2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHB11Q9Y5F2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms