Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 MIR346-201ENST00000362234 95 ntBASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 TSPY16P-201ENST00000449843 468 ntBASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDHB7Q9Y5E2 AC016027.1-202ENST00000607927 1699 ntBASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 AL512638.1-201ENST00000457493 794 ntBASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 AC069120.2-201ENST00000524091 540 ntBASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 AL390754.1-201ENST00000619088 582 ntBASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB7Q9Y5E2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 AC236430.1-201ENST00000402231 743 ntBASIC18.17■□□□□ 0.5
PCDHB7Q9Y5E2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms