Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 KRT8P23-201ENST00000560090 1207 ntBASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 LINC01225-203ENST00000563550 1244 ntBASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK2Q9NRA0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 AC093512.1-201ENST00000617969 520 ntBASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 LINC00896-202ENST00000609602 2128 ntBASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK2Q9NRA0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 FAM86GP-201ENST00000448322 971 ntBASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 AC108860.2-201ENST00000562760 2183 ntBASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.23■□□□□ 0.35
SPHK2Q9NRA0 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms