Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A20Q9NP91 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 KRT8P49-201ENST00000604166 1432 ntBASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 TOP3BP1-201ENST00000420768 1380 ntBASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 FAM185BP-201ENST00000443595 716 ntBASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 CXCL1P1-201ENST00000502804 216 ntBASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 AC018845.2-201ENST00000568326 409 ntBASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A20Q9NP91 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 AC022211.2-201ENST00000585075 2527 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 PKD1P1-201ENST00000458669 6805 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 AC005915.1-201ENST00000624912 2018 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 TUBB8P12-201ENST00000308911 1335 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 TUBB7P-202ENST00000428444 1305 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 TUBB8P7-204ENST00000567960 1332 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 AL121761.2-201ENST00000598007 1648 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 RNA5SP416-201ENST00000516838 111 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 AC099398.1-201ENST00000567919 2776 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 PCDHB17P-201ENST00000539533 2393 ntBASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A20Q9NP91 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A20Q9NP91 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms