Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ARID3AQ99856 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.44■□□□□ 0.7
ARID3AQ99856 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 ZNF444P1-201ENST00000559497 298 ntBASIC19.44■□□□□ 0.7
ARID3AQ99856 RNF126P1-202ENST00000569893 925 ntBASIC19.44■□□□□ 0.7
ARID3AQ99856 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.44■□□□□ 0.7
ARID3AQ99856 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.44■□□□□ 0.7
ARID3AQ99856 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.44■□□□□ 0.7
ARID3AQ99856 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.44■□□□□ 0.7
ARID3AQ99856 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ARID3AQ99856 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ARID3AQ99856 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.44■□□□□ 0.7
ARID3AQ99856 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.44■□□□□ 0.7
ARID3AQ99856 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
ARID3AQ99856 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
ARID3AQ99856 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARID3AQ99856 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.43■□□□□ 0.7
ARID3AQ99856 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ARID3AQ99856 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
ARID3AQ99856 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ARID3AQ99856 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.43■□□□□ 0.7
ARID3AQ99856 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ARID3AQ99856 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.43■□□□□ 0.7
ARID3AQ99856 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ARID3AQ99856 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.43■□□□□ 0.7
ARID3AQ99856 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.43■□□□□ 0.7
ARID3AQ99856 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.43■□□□□ 0.7
ARID3AQ99856 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.43■□□□□ 0.7
ARID3AQ99856 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.43■□□□□ 0.7
ARID3AQ99856 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ARID3AQ99856 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARID3AQ99856 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
ARID3AQ99856 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ARID3AQ99856 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ARID3AQ99856 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.42■□□□□ 0.7
ARID3AQ99856 AC087388.1-201ENST00000571370 1112 ntBASIC19.42■□□□□ 0.7
ARID3AQ99856 AC004263.2-201ENST00000617183 678 ntBASIC19.42■□□□□ 0.7
ARID3AQ99856 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC19.42■□□□□ 0.7
ARID3AQ99856 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ARID3AQ99856 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARID3AQ99856 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARID3AQ99856 KRT89P-201ENST00000620027 1478 ntBASIC19.41■□□□□ 0.7
ARID3AQ99856 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARID3AQ99856 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ARID3AQ99856 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC19.41■□□□□ 0.7
ARID3AQ99856 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.41■□□□□ 0.7
ARID3AQ99856 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARID3AQ99856 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARID3AQ99856 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
ARID3AQ99856 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.41■□□□□ 0.7
ARID3AQ99856 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ARID3AQ99856 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARID3AQ99856 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARID3AQ99856 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ARID3AQ99856 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms