Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 RNF152P1-201ENST00000397754 604 ntBASIC16.2■□□□□ 0.18
LRRC58Q96CX6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 AC113347.1-201ENST00000413321 391 ntBASIC16.2■□□□□ 0.18
LRRC58Q96CX6 AL845331.1-201ENST00000424978 1190 ntBASIC16.2■□□□□ 0.18
LRRC58Q96CX6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 AL137013.1-201ENST00000432946 1228 ntBASIC16.2■□□□□ 0.18
LRRC58Q96CX6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 AC124864.1-201ENST00000623408 392 ntBASIC16.2■□□□□ 0.18
LRRC58Q96CX6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 TERF1P1-201ENST00000311003 1181 ntBASIC16.19■□□□□ 0.18
LRRC58Q96CX6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 KLF4P1-201ENST00000412782 1185 ntBASIC16.19■□□□□ 0.18
LRRC58Q96CX6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 SPDYE13P-201ENST00000445314 798 ntBASIC16.19■□□□□ 0.18
LRRC58Q96CX6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 AC011840.4-201ENST00000578471 627 ntBASIC16.19■□□□□ 0.18
LRRC58Q96CX6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 AL592071.1-201ENST00000611956 408 ntBASIC16.19■□□□□ 0.18
LRRC58Q96CX6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC58Q96CX6 AC024909.3-201ENST00000611513 2257 ntBASIC16.19■□□□□ 0.18
LRRC58Q96CX6 LINC00554-201ENST00000564841 3011 ntBASIC16.19■□□□□ 0.18
LRRC58Q96CX6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 HLA-J-202ENST00000469281 1241 ntBASIC16.18■□□□□ 0.18
LRRC58Q96CX6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 AD001527.2-201ENST00000622994 785 ntBASIC16.18■□□□□ 0.18
LRRC58Q96CX6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC58Q96CX6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms