Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAF3IP1Q8TDR0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 AL139288.1-201ENST00000623748 933 ntBASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAF3IP1Q8TDR0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 KRT18P31-201ENST00000506277 1292 ntBASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AC091304.2-201ENST00000564639 760 ntBASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 MTDHP3-201ENST00000594186 672 ntBASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 LINC01711-201ENST00000598340 967 ntBASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AL022326.1-202ENST00000641533 845 ntBASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAF3IP1Q8TDR0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 AL356309.3-201ENST00000624132 1934 ntBASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms