Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ATPAF1Q5TC12 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 AC007967.3-201ENST00000434308 558 ntBASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 MINOS1P3-201ENST00000457048 203 ntBASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 AC011467.2-201ENST00000598425 242 ntBASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.81□□□□□ -0.04
ATPAF1Q5TC12 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 FAM220CP-201ENST00000395253 831 ntBASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 MIR3652-201ENST00000579335 131 ntBASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 AC010460.3-201ENST00000511359 1579 ntBASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 AC046185.3-201ENST00000623228 1824 ntBASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 LYSMD4-203ENST00000378904 2122 ntBASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATPAF1Q5TC12 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms