Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 AC027612.3-201ENST00000413684 1047 ntBASIC17.36■□□□□ 0.37
GABPB1Q06547 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.36■□□□□ 0.37
GABPB1Q06547 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
GABPB1Q06547 AC069236.1-201ENST00000604339 616 ntBASIC17.36■□□□□ 0.37
GABPB1Q06547 AL031432.3-201ENST00000607698 485 ntBASIC17.36■□□□□ 0.37
GABPB1Q06547 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GABPB1Q06547 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GABPB1Q06547 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
GABPB1Q06547 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.36■□□□□ 0.37
GABPB1Q06547 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.36■□□□□ 0.37
GABPB1Q06547 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.36■□□□□ 0.37
GABPB1Q06547 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 AC006449.6-201ENST00000612330 2296 ntBASIC17.36■□□□□ 0.37
GABPB1Q06547 BX276092.7-203ENST00000637198 1536 ntBASIC17.36■□□□□ 0.37
GABPB1Q06547 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
GABPB1Q06547 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.36■□□□□ 0.37
GABPB1Q06547 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GABPB1Q06547 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.36■□□□□ 0.37
GABPB1Q06547 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.35■□□□□ 0.37
GABPB1Q06547 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 LINC02447-202ENST00000501888 2146 ntBASIC17.35■□□□□ 0.37
GABPB1Q06547 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GABPB1Q06547 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.35■□□□□ 0.37
GABPB1Q06547 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
GABPB1Q06547 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
GABPB1Q06547 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GABPB1Q06547 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.35■□□□□ 0.37
GABPB1Q06547 BEND3P1-201ENST00000421591 1944 ntBASIC17.35■□□□□ 0.37
GABPB1Q06547 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.35■□□□□ 0.37
GABPB1Q06547 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GABPB1Q06547 CR383656.2-201ENST00000548656 2254 ntBASIC17.35■□□□□ 0.37
GABPB1Q06547 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
GABPB1Q06547 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GABPB1Q06547 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
GABPB1Q06547 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.34■□□□□ 0.37
GABPB1Q06547 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GABPB1Q06547 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GABPB1Q06547 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
GABPB1Q06547 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.34■□□□□ 0.37
GABPB1Q06547 AC110285.6-201ENST00000617652 491 ntBASIC17.34■□□□□ 0.37
GABPB1Q06547 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GABPB1Q06547 AC002310.6-201ENST00000624451 1377 ntBASIC17.34■□□□□ 0.37
GABPB1Q06547 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms