Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S1P61966 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.08■□□□□ 0.32
AP1S1P61966 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 AL513480.1-201ENST00000451731 511 ntBASIC17.08■□□□□ 0.32
AP1S1P61966 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
AP1S1P61966 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S1P61966 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S1P61966 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
AP1S1P61966 AC040169.1-201ENST00000565382 521 ntBASIC17.08■□□□□ 0.32
AP1S1P61966 AC018845.2-201ENST00000568326 409 ntBASIC17.08■□□□□ 0.32
AP1S1P61966 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S1P61966 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.08■□□□□ 0.32
AP1S1P61966 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
AP1S1P61966 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.08■□□□□ 0.32
AP1S1P61966 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
AP1S1P61966 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.08■□□□□ 0.32
AP1S1P61966 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
AP1S1P61966 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
AP1S1P61966 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.08■□□□□ 0.32
AP1S1P61966 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S1P61966 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AP1S1P61966 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.07■□□□□ 0.32
AP1S1P61966 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
AP1S1P61966 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
AP1S1P61966 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.07■□□□□ 0.32
AP1S1P61966 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.07■□□□□ 0.32
AP1S1P61966 PGAM5P1-201ENST00000518923 814 ntBASIC17.07■□□□□ 0.32
AP1S1P61966 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.07■□□□□ 0.32
AP1S1P61966 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.07■□□□□ 0.32
AP1S1P61966 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.07■□□□□ 0.32
AP1S1P61966 AL645728.2-201ENST00000641974 660 ntBASIC17.07■□□□□ 0.32
AP1S1P61966 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
AP1S1P61966 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
AP1S1P61966 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AP1S1P61966 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
AP1S1P61966 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S1P61966 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 BCAR1-209ENST00000546196 1340 ntBASIC17.06■□□□□ 0.32
AP1S1P61966 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
AP1S1P61966 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP1S1P61966 MIR4515-201ENST00000584082 81 ntBASIC17.06■□□□□ 0.32
AP1S1P61966 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 AC013467.2-201ENST00000605472 835 ntBASIC17.06■□□□□ 0.32
AP1S1P61966 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 AC004877.2-201ENST00000623941 599 ntBASIC17.06■□□□□ 0.32
AP1S1P61966 AP001350.2-201ENST00000625104 1094 ntBASIC17.06■□□□□ 0.32
AP1S1P61966 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
AP1S1P61966 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 AC106820.2-201ENST00000563775 3264 ntBASIC17.06■□□□□ 0.32
AP1S1P61966 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 LINC00895-201ENST00000629028 1637 ntBASIC17.06■□□□□ 0.32
AP1S1P61966 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
AP1S1P61966 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S1P61966 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
AP1S1P61966 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S1P61966 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
AP1S1P61966 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S1P61966 AC131009.4-201ENST00000624048 1740 ntBASIC17.05■□□□□ 0.32
AP1S1P61966 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.05■□□□□ 0.32
AP1S1P61966 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S1P61966 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.05■□□□□ 0.32
AP1S1P61966 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms