Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HOXA1P49639 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HOXA1P49639 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 KRT8P47-201ENST00000604727 1398 ntBASIC14.18□□□□□ -0.14
HOXA1P49639 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.18□□□□□ -0.14
HOXA1P49639 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HOXA1P49639 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
HOXA1P49639 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 BX276092.7-203ENST00000637198 1536 ntBASIC14.17□□□□□ -0.14
HOXA1P49639 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
HOXA1P49639 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXA1P49639 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXA1P49639 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXA1P49639 ECEL1P3-201ENST00000427961 737 ntBASIC14.17□□□□□ -0.14
HOXA1P49639 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.17□□□□□ -0.14
HOXA1P49639 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXA1P49639 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXA1P49639 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HOXA1P49639 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.17□□□□□ -0.14
HOXA1P49639 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXA1P49639 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXA1P49639 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.17□□□□□ -0.14
HOXA1P49639 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HOXA1P49639 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HOXA1P49639 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA1P49639 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HOXA1P49639 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 KRT8P9-201ENST00000558927 1449 ntBASIC14.16□□□□□ -0.14
HOXA1P49639 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HOXA1P49639 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXA1P49639 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HOXA1P49639 MMP23A-201ENST00000234610 1017 ntBASIC14.16□□□□□ -0.14
HOXA1P49639 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXA1P49639 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HOXA1P49639 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXA1P49639 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXA1P49639 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXA1P49639 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
HOXA1P49639 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXA1P49639 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA1P49639 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXA1P49639 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA1P49639 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms