Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.02□□□□□ -0.01
SOX2P48431 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
SOX2P48431 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 AL135999.2-201ENST00000622438 1686 ntBASIC15.02□□□□□ -0.01
SOX2P48431 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SOX2P48431 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SOX2P48431 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.02□□□□□ -0.01
SOX2P48431 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.02□□□□□ -0.01
SOX2P48431 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SOX2P48431 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
SOX2P48431 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 AC068587.6-202ENST00000641839 5619 ntBASIC15.01□□□□□ -0.01
SOX2P48431 AC125634.1-201ENST00000438758 1403 ntBASIC15.01□□□□□ -0.01
SOX2P48431 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.01□□□□□ -0.01
SOX2P48431 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
SOX2P48431 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 TSPY5P-201ENST00000426936 936 ntBASIC15.01□□□□□ -0.01
SOX2P48431 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 HOMER2P1-201ENST00000455653 964 ntBASIC15.01□□□□□ -0.01
SOX2P48431 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 GUSBP12-201ENST00000513727 720 ntBASIC15.01□□□□□ -0.01
SOX2P48431 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.01□□□□□ -0.01
SOX2P48431 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.01□□□□□ -0.01
SOX2P48431 STK25P1-201ENST00000585406 838 ntBASIC15.01□□□□□ -0.01
SOX2P48431 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.01□□□□□ -0.01
SOX2P48431 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.01□□□□□ -0.01
SOX2P48431 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.01□□□□□ -0.01
SOX2P48431 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.01□□□□□ -0.01
SOX2P48431 FRMD8P1-201ENST00000440433 1524 ntBASIC15.01□□□□□ -0.01
SOX2P48431 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.01□□□□□ -0.01
SOX2P48431 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SOX2P48431 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SOX2P48431 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15□□□□□ -0.01
SOX2P48431 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15□□□□□ -0.01
SOX2P48431 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15□□□□□ -0.01
SOX2P48431 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15□□□□□ -0.01
SOX2P48431 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SOX2P48431 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SOX2P48431 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15□□□□□ -0.01
SOX2P48431 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 AC103564.2-201ENST00000432853 1299 ntBASIC15□□□□□ -0.01
SOX2P48431 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15□□□□□ -0.01
SOX2P48431 AC122714.2-201ENST00000502787 707 ntBASIC15□□□□□ -0.01
SOX2P48431 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 AC133561.5-201ENST00000635547 218 ntBASIC15□□□□□ -0.01
SOX2P48431 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SOX2P48431 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
SOX2P48431 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SOX2P48431 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SOX2P48431 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15□□□□□ -0.01
SOX2P48431 CYP2T1P-202ENST00000641596 2535 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms