Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NCK1P16333 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.13■□□□□ 0.17
NCK1P16333 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCK1P16333 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.12■□□□□ 0.17
NCK1P16333 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.12■□□□□ 0.17
NCK1P16333 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.12■□□□□ 0.17
NCK1P16333 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.12■□□□□ 0.17
NCK1P16333 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.12■□□□□ 0.17
NCK1P16333 STK25P1-201ENST00000585406 838 ntBASIC16.12■□□□□ 0.17
NCK1P16333 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NCK1P16333 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.12■□□□□ 0.17
NCK1P16333 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.12■□□□□ 0.17
NCK1P16333 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCK1P16333 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
NCK1P16333 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.12■□□□□ 0.17
NCK1P16333 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.12■□□□□ 0.17
NCK1P16333 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.11■□□□□ 0.17
NCK1P16333 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NCK1P16333 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.11■□□□□ 0.17
NCK1P16333 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.11■□□□□ 0.17
NCK1P16333 AC103702.1-201ENST00000548801 2630 ntBASIC16.11■□□□□ 0.17
NCK1P16333 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.11■□□□□ 0.17
NCK1P16333 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.11■□□□□ 0.17
NCK1P16333 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.11■□□□□ 0.17
NCK1P16333 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.11■□□□□ 0.17
NCK1P16333 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NCK1P16333 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
NCK1P16333 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 AC139887.4-201ENST00000607877 719 ntBASIC16.11■□□□□ 0.17
NCK1P16333 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.11■□□□□ 0.17
NCK1P16333 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.11■□□□□ 0.17
NCK1P16333 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.11■□□□□ 0.17
NCK1P16333 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.11■□□□□ 0.17
NCK1P16333 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
NCK1P16333 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.11■□□□□ 0.17
NCK1P16333 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.11■□□□□ 0.17
NCK1P16333 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCK1P16333 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 HBZP1-201ENST00000354915 429 ntBASIC16.1■□□□□ 0.17
NCK1P16333 LIN28AP1-201ENST00000429574 405 ntBASIC16.1■□□□□ 0.17
NCK1P16333 ATP5G1P1-201ENST00000448724 379 ntBASIC16.1■□□□□ 0.17
NCK1P16333 KRT18P38-201ENST00000449496 1282 ntBASIC16.1■□□□□ 0.17
NCK1P16333 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.1■□□□□ 0.17
NCK1P16333 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.1■□□□□ 0.17
NCK1P16333 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.1■□□□□ 0.17
NCK1P16333 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.1■□□□□ 0.17
NCK1P16333 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.1■□□□□ 0.17
NCK1P16333 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 AC125634.1-201ENST00000438758 1403 ntBASIC16.1■□□□□ 0.17
NCK1P16333 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
NCK1P16333 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCK1P16333 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms