Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC22.03■■□□□ 1.12
COL5A2P05997 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.03■■□□□ 1.12
COL5A2P05997 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC22.03■■□□□ 1.12
COL5A2P05997 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC22.03■■□□□ 1.12
COL5A2P05997 SLC25A6P5-201ENST00000435663 894 ntBASIC22.03■■□□□ 1.12
COL5A2P05997 AC022210.1-201ENST00000449856 793 ntBASIC22.03■■□□□ 1.12
COL5A2P05997 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC22.03■■□□□ 1.12
COL5A2P05997 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.03■■□□□ 1.12
COL5A2P05997 AL033527.4-201ENST00000641026 673 ntBASIC22.03■■□□□ 1.12
COL5A2P05997 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.02■■□□□ 1.12
COL5A2P05997 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC22.02■■□□□ 1.12
COL5A2P05997 AC016396.2-201ENST00000562575 1417 ntBASIC22.02■■□□□ 1.12
COL5A2P05997 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
COL5A2P05997 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.02■■□□□ 1.12
COL5A2P05997 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL5A2P05997 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
COL5A2P05997 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
COL5A2P05997 TTTY23B-201ENST00000442790 549 ntBASIC22.02■■□□□ 1.12
COL5A2P05997 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC22.02■■□□□ 1.12
COL5A2P05997 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC22.02■■□□□ 1.12
COL5A2P05997 RAB43P1-201ENST00000561790 589 ntBASIC22.02■■□□□ 1.12
COL5A2P05997 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC22.02■■□□□ 1.12
COL5A2P05997 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
COL5A2P05997 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC22.01■■□□□ 1.11
COL5A2P05997 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.01■■□□□ 1.11
COL5A2P05997 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.01■■□□□ 1.11
COL5A2P05997 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
COL5A2P05997 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 WDR53-204ENST00000433160 887 ntTSL 5 BASIC22.01■■□□□ 1.11
COL5A2P05997 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
COL5A2P05997 CD81-207ENST00000481687 890 ntTSL 2 BASIC22.01■■□□□ 1.11
COL5A2P05997 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC22.01■■□□□ 1.11
COL5A2P05997 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC22.01■■□□□ 1.11
COL5A2P05997 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC22.01■■□□□ 1.11
COL5A2P05997 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC22.01■■□□□ 1.11
COL5A2P05997 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL5A2P05997 TPR-209ENST00000613151 2478 ntTSL 5 BASIC22.01■■□□□ 1.11
COL5A2P05997 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC22.01■■□□□ 1.11
COL5A2P05997 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22■■□□□ 1.11
COL5A2P05997 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22■■□□□ 1.11
COL5A2P05997 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 AC011495.1-201ENST00000498085 584 ntBASIC22■■□□□ 1.11
COL5A2P05997 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC22■■□□□ 1.11
COL5A2P05997 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC22■■□□□ 1.11
COL5A2P05997 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC22■■□□□ 1.11
COL5A2P05997 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC22■■□□□ 1.11
COL5A2P05997 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC22■■□□□ 1.11
COL5A2P05997 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22■■□□□ 1.11
COL5A2P05997 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL5A2P05997 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.99■■□□□ 1.11
COL5A2P05997 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.99■■□□□ 1.11
COL5A2P05997 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
COL5A2P05997 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.99■■□□□ 1.11
COL5A2P05997 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.99■■□□□ 1.11
COL5A2P05997 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.99■■□□□ 1.11
COL5A2P05997 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms