Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-2O95096 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-2O95096 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NKX2-2O95096 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
NKX2-2O95096 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 AC092910.1-201ENST00000482027 1129 ntBASIC15.67■□□□□ 0.1
NKX2-2O95096 AC107918.2-201ENST00000530817 355 ntBASIC15.67■□□□□ 0.1
NKX2-2O95096 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 AP001005.1-201ENST00000571755 1248 ntBASIC15.67■□□□□ 0.1
NKX2-2O95096 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.67■□□□□ 0.1
NKX2-2O95096 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 AC117500.6-201ENST00000624871 588 ntBASIC15.67■□□□□ 0.1
NKX2-2O95096 AL139011.1-202ENST00000642063 584 ntBASIC15.67■□□□□ 0.1
NKX2-2O95096 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-2O95096 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX2-2O95096 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 AC129492.6-201ENST00000611383 1305 ntBASIC15.67■□□□□ 0.1
NKX2-2O95096 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NKX2-2O95096 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX2-2O95096 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.66■□□□□ 0.1
NKX2-2O95096 AL603756.1-201ENST00000606511 2163 ntBASIC15.66■□□□□ 0.1
NKX2-2O95096 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NKX2-2O95096 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
NKX2-2O95096 AC009078.2-202ENST00000463353 338 ntBASIC15.66■□□□□ 0.1
NKX2-2O95096 AC108073.2-201ENST00000464002 357 ntBASIC15.66■□□□□ 0.1
NKX2-2O95096 AC093909.1-201ENST00000504731 1122 ntBASIC15.66■□□□□ 0.1
NKX2-2O95096 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.66■□□□□ 0.1
NKX2-2O95096 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 AC091167.2-201ENST00000579581 588 ntBASIC15.66■□□□□ 0.1
NKX2-2O95096 MIR4492-201ENST00000581627 80 ntBASIC15.66■□□□□ 0.1
NKX2-2O95096 MPDU1-223ENST00000582151 728 ntBASIC15.66■□□□□ 0.1
NKX2-2O95096 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
NKX2-2O95096 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX2-2O95096 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NKX2-2O95096 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX2-2O95096 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.65■□□□□ 0.1
NKX2-2O95096 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.65■□□□□ 0.1
NKX2-2O95096 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NKX2-2O95096 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX2-2O95096 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NKX2-2O95096 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms