Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1BO75841 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.83□□□□□ -0.03
UPK1BO75841 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1BO75841 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1BO75841 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.83□□□□□ -0.03
UPK1BO75841 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1BO75841 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1BO75841 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
UPK1BO75841 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK1BO75841 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
UPK1BO75841 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
UPK1BO75841 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
UPK1BO75841 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.83□□□□□ -0.04
UPK1BO75841 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
UPK1BO75841 AC006015.1-201ENST00000429970 570 ntBASIC14.83□□□□□ -0.04
UPK1BO75841 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.83□□□□□ -0.04
UPK1BO75841 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.83□□□□□ -0.04
UPK1BO75841 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.83□□□□□ -0.04
UPK1BO75841 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.83□□□□□ -0.04
UPK1BO75841 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UPK1BO75841 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UPK1BO75841 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK1BO75841 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
UPK1BO75841 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
UPK1BO75841 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
UPK1BO75841 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK1BO75841 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK1BO75841 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
UPK1BO75841 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
UPK1BO75841 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
UPK1BO75841 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 AC002558.1-201ENST00000488906 803 ntBASIC14.82□□□□□ -0.04
UPK1BO75841 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1BO75841 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.82□□□□□ -0.04
UPK1BO75841 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1BO75841 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.82□□□□□ -0.04
UPK1BO75841 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.82□□□□□ -0.04
UPK1BO75841 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
UPK1BO75841 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.82□□□□□ -0.04
UPK1BO75841 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
UPK1BO75841 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UPK1BO75841 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
UPK1BO75841 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 CICP14-201ENST00000629111 2732 ntBASIC14.81□□□□□ -0.04
UPK1BO75841 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.81□□□□□ -0.04
UPK1BO75841 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UPK1BO75841 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
UPK1BO75841 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
UPK1BO75841 MIPEPP3-201ENST00000412105 444 ntBASIC14.81□□□□□ -0.04
UPK1BO75841 NIFKP9-201ENST00000419265 221 ntBASIC14.81□□□□□ -0.04
UPK1BO75841 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms