Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
ACTN4O43707 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ACTN4O43707 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ACTN4O43707 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ACTN4O43707 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
ACTN4O43707 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
ACTN4O43707 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ACTN4O43707 AL021920.2-201ENST00000624828 1351 ntBASIC19.06■□□□□ 0.64
ACTN4O43707 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.06■□□□□ 0.64
ACTN4O43707 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ACTN4O43707 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.06■□□□□ 0.64
ACTN4O43707 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.06■□□□□ 0.64
ACTN4O43707 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.06■□□□□ 0.64
ACTN4O43707 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.06■□□□□ 0.64
ACTN4O43707 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ACTN4O43707 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.06■□□□□ 0.64
ACTN4O43707 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.06■□□□□ 0.64
ACTN4O43707 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.06■□□□□ 0.64
ACTN4O43707 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ACTN4O43707 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ACTN4O43707 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.05■□□□□ 0.64
ACTN4O43707 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.05■□□□□ 0.64
ACTN4O43707 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.05■□□□□ 0.64
ACTN4O43707 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ACTN4O43707 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 AKR1C7P-201ENST00000305623 895 ntBASIC19.05■□□□□ 0.64
ACTN4O43707 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.05■□□□□ 0.64
ACTN4O43707 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.05■□□□□ 0.64
ACTN4O43707 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.05■□□□□ 0.64
ACTN4O43707 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
ACTN4O43707 AL589182.2-201ENST00000619332 1049 ntBASIC19.05■□□□□ 0.64
ACTN4O43707 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.05■□□□□ 0.64
ACTN4O43707 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
ACTN4O43707 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.05■□□□□ 0.64
ACTN4O43707 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 DOC2GP-204ENST00000639052 2548 ntBASIC19.05■□□□□ 0.64
ACTN4O43707 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.05■□□□□ 0.64
ACTN4O43707 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACTN4O43707 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ACTN4O43707 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.04■□□□□ 0.64
ACTN4O43707 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.04■□□□□ 0.64
ACTN4O43707 AL662844.4-201ENST00000606367 2838 ntBASIC19.04■□□□□ 0.64
ACTN4O43707 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.04■□□□□ 0.64
ACTN4O43707 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ACTN4O43707 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.04■□□□□ 0.64
ACTN4O43707 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.04■□□□□ 0.64
ACTN4O43707 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.04■□□□□ 0.64
ACTN4O43707 PAWRP1-201ENST00000451083 565 ntBASIC19.04■□□□□ 0.64
ACTN4O43707 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.04■□□□□ 0.64
ACTN4O43707 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.04■□□□□ 0.64
ACTN4O43707 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.04■□□□□ 0.64
ACTN4O43707 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 AL121772.3-201ENST00000610840 674 ntBASIC19.04■□□□□ 0.64
ACTN4O43707 REXO1L6P-202ENST00000619970 1078 ntBASIC19.04■□□□□ 0.64
ACTN4O43707 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms