Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A1O14983 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP2A1O14983 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.39■□□□□ 0.7
ATP2A1O14983 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP2A1O14983 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ATP2A1O14983 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ATP2A1O14983 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 PMS2P4-201ENST00000412466 1052 ntBASIC19.39■□□□□ 0.69
ATP2A1O14983 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 FAM58DP-201ENST00000428076 619 ntBASIC19.39■□□□□ 0.69
ATP2A1O14983 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ATP2A1O14983 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.39■□□□□ 0.69
ATP2A1O14983 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 AC093512.1-201ENST00000617969 520 ntBASIC19.39■□□□□ 0.69
ATP2A1O14983 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP2A1O14983 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP2A1O14983 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.39■□□□□ 0.69
ATP2A1O14983 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP2A1O14983 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP2A1O14983 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
ATP2A1O14983 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP2A1O14983 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A1O14983 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ATP2A1O14983 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP2A1O14983 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ATP2A1O14983 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 FRMD8P1-201ENST00000440433 1524 ntBASIC19.38■□□□□ 0.69
ATP2A1O14983 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 AC087641.1-201ENST00000557561 1021 ntBASIC19.38■□□□□ 0.69
ATP2A1O14983 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.38■□□□□ 0.69
ATP2A1O14983 MPDU1-223ENST00000582151 728 ntBASIC19.38■□□□□ 0.69
ATP2A1O14983 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP2A1O14983 AP001059.3-201ENST00000619053 235 ntBASIC19.38■□□□□ 0.69
ATP2A1O14983 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2A1O14983 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ATP2A1O14983 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2A1O14983 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2A1O14983 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ATP2A1O14983 AC018470.1-201ENST00000624790 3129 ntBASIC19.37■□□□□ 0.69
ATP2A1O14983 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP2A1O14983 WASH6P-202ENST00000359512 1437 ntBASIC19.37■□□□□ 0.69
ATP2A1O14983 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP2A1O14983 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2A1O14983 FAM8A3P-201ENST00000427218 844 ntBASIC19.37■□□□□ 0.69
ATP2A1O14983 FAM86GP-201ENST00000448322 971 ntBASIC19.37■□□□□ 0.69
ATP2A1O14983 AC067863.1-201ENST00000494933 530 ntBASIC19.37■□□□□ 0.69
ATP2A1O14983 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.37■□□□□ 0.69
ATP2A1O14983 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.37■□□□□ 0.69
ATP2A1O14983 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATP2A1O14983 AC011467.4-201ENST00000594891 528 ntBASIC19.37■□□□□ 0.69
ATP2A1O14983 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP2A1O14983 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATP2A1O14983 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2A1O14983 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2A1O14983 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A1O14983 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP2A1O14983 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms