Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.24■□□□□ 0.03
TVP23AA6NH52 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TVP23AA6NH52 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TVP23AA6NH52 AC148477.5-201ENST00000625164 1645 ntBASIC15.24■□□□□ 0.03
TVP23AA6NH52 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.24■□□□□ 0.03
TVP23AA6NH52 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TVP23AA6NH52 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 PCDHB17P-201ENST00000539533 2393 ntBASIC15.23■□□□□ 0.03
TVP23AA6NH52 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 IGHV3-47-201ENST00000425060 335 ntBASIC15.23■□□□□ 0.03
TVP23AA6NH52 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 AP000867.3-201ENST00000524675 377 ntBASIC15.23■□□□□ 0.03
TVP23AA6NH52 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TVP23AA6NH52 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TVP23AA6NH52 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 PMPCAP1-201ENST00000508114 1576 ntBASIC15.22■□□□□ 0.03
TVP23AA6NH52 AL662844.4-201ENST00000606367 2838 ntBASIC15.22■□□□□ 0.03
TVP23AA6NH52 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TVP23AA6NH52 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TVP23AA6NH52 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms