Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 HLA-J-202ENST00000469281 1241 ntBASIC24.9■■□□□ 1.58
HFM1A2PYH4 CYMP-203ENST00000474680 1263 ntBASIC24.9■■□□□ 1.58
HFM1A2PYH4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 KRT18P28-201ENST00000453838 1332 ntBASIC24.9■■□□□ 1.58
HFM1A2PYH4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 AC142381.1-201ENST00000426099 345 ntBASIC24.89■■□□□ 1.58
HFM1A2PYH4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 AC073389.1-201ENST00000595595 795 ntBASIC24.89■■□□□ 1.58
HFM1A2PYH4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HFM1A2PYH4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
HFM1A2PYH4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
HFM1A2PYH4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
HFM1A2PYH4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
HFM1A2PYH4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
HFM1A2PYH4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC24.89■■□□□ 1.57
HFM1A2PYH4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.57
HFM1A2PYH4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
HFM1A2PYH4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC24.89■■□□□ 1.57
HFM1A2PYH4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC24.88■■□□□ 1.57
HFM1A2PYH4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC24.88■■□□□ 1.57
HFM1A2PYH4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC24.88■■□□□ 1.57
HFM1A2PYH4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HFM1A2PYH4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC24.88■■□□□ 1.57
HFM1A2PYH4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
HFM1A2PYH4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
HFM1A2PYH4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HFM1A2PYH4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HFM1A2PYH4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 FAM58DP-201ENST00000428076 619 ntBASIC24.87■■□□□ 1.57
HFM1A2PYH4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 AC008267.7-201ENST00000624570 1194 ntBASIC24.87■■□□□ 1.57
HFM1A2PYH4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HFM1A2PYH4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
HFM1A2PYH4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC24.87■■□□□ 1.57
HFM1A2PYH4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms