Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 AL023284.2-201ENST00000405850 579 ntBASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 AC104581.4-201ENST00000623126 3052 ntBASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH1Q9Y2L9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 NUDT16P1-203ENST00000513809 620 ntBASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 AP003071.4-201ENST00000562276 1284 ntBASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 AL603832.2-201ENST00000566195 2125 ntBASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 AL445675.2-201ENST00000620291 557 ntBASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 AC073912.3-201ENST00000624414 853 ntBASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH1Q9Y2L9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 SNX18-202ENST00000343017 3140 ntBASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRCH1Q9Y2L9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms