Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 AL359881.3-201ENST00000602640 1721 ntBASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
CDC42SE1Q9NRR8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 SDHAP1-207ENST00000440850 2000 ntBASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 RHBDF1P1-201ENST00000427504 1941 ntBASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 AR-208ENST00000612452 10676 ntTSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 AC093536.1-201ENST00000569153 554 ntBASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 HEIH-201ENST00000623091 1652 ntBASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 PHGDH-210ENST00000641115 1638 ntBASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC8.64□□□□□ -1.03
CDC42SE1Q9NRR8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 KRT8P17-201ENST00000453110 1448 ntBASIC8.63□□□□□ -1.03
CDC42SE1Q9NRR8 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms