Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TLR9Q9NR96 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR9Q9NR96 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 GAPDHP21-201ENST00000450301 1010 ntBASIC17.97■□□□□ 0.47
TLR9Q9NR96 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.97■□□□□ 0.47
TLR9Q9NR96 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 AP000842.3-202ENST00000569238 1080 ntBASIC17.97■□□□□ 0.47
TLR9Q9NR96 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TLR9Q9NR96 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR9Q9NR96 GNAS-203ENST00000306120 1878 ntBASIC17.97■□□□□ 0.47
TLR9Q9NR96 AC020916.1-201ENST00000587762 1774 ntBASIC17.96■□□□□ 0.47
TLR9Q9NR96 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR9Q9NR96 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR9Q9NR96 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR9Q9NR96 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR9Q9NR96 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 AC027307.2-201ENST00000591252 911 ntBASIC17.96■□□□□ 0.47
TLR9Q9NR96 AL031055.1-201ENST00000606362 631 ntBASIC17.96■□□□□ 0.47
TLR9Q9NR96 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR9Q9NR96 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR9Q9NR96 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR9Q9NR96 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TLR9Q9NR96 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TLR9Q9NR96 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
TLR9Q9NR96 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 RNU1-129P-201ENST00000384064 167 ntBASIC17.95■□□□□ 0.46
TLR9Q9NR96 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 U1.21-201ENST00000580816 167 ntBASIC17.95■□□□□ 0.46
TLR9Q9NR96 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TLR9Q9NR96 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR9Q9NR96 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms