Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 AC006449.6-201ENST00000612330 2296 ntBASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 GPR89P-201ENST00000407924 1495 ntBASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 AL138781.1-201ENST00000566567 1274 ntBASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 AC112504.1-201ENST00000623415 1841 ntBASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 AL359258.3-201ENST00000622910 2331 ntBASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLIRPQ9GZT3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 PVRIG2P-201ENST00000435460 978 ntBASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLIRPQ9GZT3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SLIRPQ9GZT3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
SLIRPQ9GZT3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLIRPQ9GZT3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.96□□□□□ -0.01
SLIRPQ9GZT3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLIRPQ9GZT3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLIRPQ9GZT3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLIRPQ9GZT3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms