Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
COL25A1Q9BXS0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL25A1Q9BXS0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 ESPNP-201ENST00000270691 2015 ntBASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 AL512430.1-201ENST00000392575 860 ntBASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 EEF1DP6-201ENST00000449232 372 ntBASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 AC092337.1-201ENST00000568699 1129 ntBASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 AC133539.2-201ENST00000604757 467 ntBASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 RN7SL736P-201ENST00000613111 269 ntBASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL25A1Q9BXS0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 AC016694.1-201ENST00000434179 700 ntBASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 PRYP6-201ENST00000514804 343 ntBASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 AL158211.5-201ENST00000623583 2518 ntBASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.93■□□□□ 0.3
COL25A1Q9BXS0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 AC244669.2-201ENST00000612320 853 ntBASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.92■□□□□ 0.3
COL25A1Q9BXS0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.91■□□□□ 0.3
COL25A1Q9BXS0 RNA5SP410-201ENST00000516285 106 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms