Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN18Q99952 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN18Q99952 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN18Q99952 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTPN18Q99952 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PTPN18Q99952 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN18Q99952 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 AC090164.3-201ENST00000610780 2143 ntBASIC19.27■□□□□ 0.68
PTPN18Q99952 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PTPN18Q99952 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PTPN18Q99952 SPDYE19P-201ENST00000338590 713 ntBASIC19.27■□□□□ 0.68
PTPN18Q99952 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
PTPN18Q99952 AC087499.6-201ENST00000411576 835 ntBASIC19.27■□□□□ 0.68
PTPN18Q99952 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN18Q99952 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN18Q99952 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.27■□□□□ 0.68
PTPN18Q99952 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PTPN18Q99952 AL079307.3-201ENST00000556114 283 ntBASIC19.27■□□□□ 0.68
PTPN18Q99952 RAB43P1-201ENST00000561790 589 ntBASIC19.27■□□□□ 0.68
PTPN18Q99952 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPN18Q99952 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN18Q99952 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN18Q99952 BTBD7P1-201ENST00000447253 1453 ntBASIC19.27■□□□□ 0.67
PTPN18Q99952 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.27■□□□□ 0.67
PTPN18Q99952 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN18Q99952 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.27■□□□□ 0.67
PTPN18Q99952 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.27■□□□□ 0.67
PTPN18Q99952 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN18Q99952 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN18Q99952 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN18Q99952 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN18Q99952 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN18Q99952 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN18Q99952 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTPN18Q99952 AL138781.2-201ENST00000617896 1843 ntBASIC19.26■□□□□ 0.67
PTPN18Q99952 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN18Q99952 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.26■□□□□ 0.67
PTPN18Q99952 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.26■□□□□ 0.67
PTPN18Q99952 SPDYE18-201ENST00000510091 1050 ntBASIC19.26■□□□□ 0.67
PTPN18Q99952 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.26■□□□□ 0.67
PTPN18Q99952 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.26■□□□□ 0.67
PTPN18Q99952 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN18Q99952 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.26■□□□□ 0.67
PTPN18Q99952 SPTSSB-204ENST00000617024 1292 ntBASIC19.26■□□□□ 0.67
PTPN18Q99952 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN18Q99952 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.26■□□□□ 0.67
PTPN18Q99952 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN18Q99952 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN18Q99952 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN18Q99952 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN18Q99952 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN18Q99952 AL023806.1-201ENST00000603994 1649 ntBASIC19.25■□□□□ 0.67
PTPN18Q99952 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN18Q99952 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN18Q99952 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN18Q99952 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN18Q99952 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN18Q99952 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PTPN18Q99952 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 DOC2GP-202ENST00000514950 1163 ntBASIC19.25■□□□□ 0.67
PTPN18Q99952 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN18Q99952 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PTPN18Q99952 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN18Q99952 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN18Q99952 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PTPN18Q99952 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms