Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TERF1P3-201ENST00000505638 1227 ntBASIC18.01■□□□□ 0.47
CASD1Q96PB1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.01■□□□□ 0.47
CASD1Q96PB1 AF228730.6-201ENST00000641497 218 ntBASIC18.01■□□□□ 0.47
CASD1Q96PB1 AC084121.3-201ENST00000641716 218 ntBASIC18.01■□□□□ 0.47
CASD1Q96PB1 AC105233.6-201ENST00000642093 218 ntBASIC18.01■□□□□ 0.47
CASD1Q96PB1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CASD1Q96PB1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.01■□□□□ 0.47
CASD1Q96PB1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18■□□□□ 0.47
CASD1Q96PB1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18■□□□□ 0.47
CASD1Q96PB1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18■□□□□ 0.47
CASD1Q96PB1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 NEFHP1-201ENST00000412845 2629 ntBASIC18■□□□□ 0.47
CASD1Q96PB1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CASD1Q96PB1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18■□□□□ 0.47
CASD1Q96PB1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18■□□□□ 0.47
CASD1Q96PB1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18■□□□□ 0.47
CASD1Q96PB1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CASD1Q96PB1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18■□□□□ 0.47
CASD1Q96PB1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18■□□□□ 0.47
CASD1Q96PB1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18■□□□□ 0.47
CASD1Q96PB1 LINC02560-201ENST00000596379 459 ntBASIC18■□□□□ 0.47
CASD1Q96PB1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18■□□□□ 0.47
CASD1Q96PB1 AC108860.2-201ENST00000562760 2183 ntBASIC18■□□□□ 0.47
CASD1Q96PB1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CASD1Q96PB1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18■□□□□ 0.47
CASD1Q96PB1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 FAM207CP-201ENST00000443486 507 ntBASIC17.99■□□□□ 0.47
CASD1Q96PB1 AC105233.2-201ENST00000523697 349 ntBASIC17.99■□□□□ 0.47
CASD1Q96PB1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 AF228730.5-201ENST00000530288 346 ntBASIC17.99■□□□□ 0.47
CASD1Q96PB1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 AC073389.1-201ENST00000595595 795 ntBASIC17.99■□□□□ 0.47
CASD1Q96PB1 AC008761.3-201ENST00000624803 892 ntBASIC17.99■□□□□ 0.47
CASD1Q96PB1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CASD1Q96PB1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CASD1Q96PB1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CASD1Q96PB1 AC020763.4-201ENST00000623414 4170 ntBASIC17.98■□□□□ 0.47
CASD1Q96PB1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CASD1Q96PB1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CASD1Q96PB1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CASD1Q96PB1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CASD1Q96PB1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CASD1Q96PB1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CASD1Q96PB1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.98■□□□□ 0.47
CASD1Q96PB1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CASD1Q96PB1 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.98■□□□□ 0.47
CASD1Q96PB1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CASD1Q96PB1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.98■□□□□ 0.47
CASD1Q96PB1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms