Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTP4Q96DX8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTP4Q96DX8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTP4Q96DX8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTP4Q96DX8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.33■□□□□ 0.37
RTP4Q96DX8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTP4Q96DX8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTP4Q96DX8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 SAPCD2P3-201ENST00000455031 850 ntBASIC17.33■□□□□ 0.36
RTP4Q96DX8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 SART3-203ENST00000546611 1184 ntBASIC17.33■□□□□ 0.36
RTP4Q96DX8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 REXO1L6P-202ENST00000619970 1078 ntBASIC17.33■□□□□ 0.36
RTP4Q96DX8 AC004706.3-202ENST00000621574 984 ntBASIC17.33■□□□□ 0.36
RTP4Q96DX8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.33■□□□□ 0.36
RTP4Q96DX8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.33■□□□□ 0.36
RTP4Q96DX8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTP4Q96DX8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 MRPL3P1-201ENST00000400109 1033 ntBASIC17.32■□□□□ 0.36
RTP4Q96DX8 AL022342.1-201ENST00000400363 863 ntBASIC17.32■□□□□ 0.36
RTP4Q96DX8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 AC139887.3-201ENST00000568585 713 ntBASIC17.32■□□□□ 0.36
RTP4Q96DX8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 DOC2GP-204ENST00000639052 2548 ntBASIC17.32■□□□□ 0.36
RTP4Q96DX8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RTP4Q96DX8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTP4Q96DX8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTP4Q96DX8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.31■□□□□ 0.36
RTP4Q96DX8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms