Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM4Q8WVI0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.58□□□□□ -0.07
SMIM4Q8WVI0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM4Q8WVI0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.58□□□□□ -0.07
SMIM4Q8WVI0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 RPS2P55-201ENST00000397318 883 ntBASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 MTCL1P1-201ENST00000446207 792 ntBASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM4Q8WVI0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 LINC02228-204ENST00000642115 2962 ntBASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM4Q8WVI0 AC010491.1-201ENST00000563101 2797 ntBASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 AC006058.4-201ENST00000624016 1670 ntBASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM4Q8WVI0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms