Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 OR7E47P-204ENST00000575924 449 ntBASIC18.02■□□□□ 0.48
UBA3Q8TBC4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 Z83851.2-201ENST00000609564 659 ntBASIC18.02■□□□□ 0.48
UBA3Q8TBC4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
UBA3Q8TBC4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.47
UBA3Q8TBC4 AC002310.6-201ENST00000624451 1377 ntBASIC18.02■□□□□ 0.47
UBA3Q8TBC4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBA3Q8TBC4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBA3Q8TBC4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.02■□□□□ 0.47
UBA3Q8TBC4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBA3Q8TBC4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBA3Q8TBC4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBA3Q8TBC4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 MRPL20P1-201ENST00000400819 433 ntBASIC18.01■□□□□ 0.47
UBA3Q8TBC4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 MIR4751-201ENST00000578027 74 ntBASIC18.01■□□□□ 0.47
UBA3Q8TBC4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 PCDHB17P-201ENST00000539533 2393 ntBASIC18.01■□□□□ 0.47
UBA3Q8TBC4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
UBA3Q8TBC4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18■□□□□ 0.47
UBA3Q8TBC4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
UBA3Q8TBC4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18■□□□□ 0.47
UBA3Q8TBC4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18■□□□□ 0.47
UBA3Q8TBC4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UBA3Q8TBC4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18■□□□□ 0.47
UBA3Q8TBC4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18■□□□□ 0.47
UBA3Q8TBC4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18■□□□□ 0.47
UBA3Q8TBC4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18■□□□□ 0.47
UBA3Q8TBC4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 AC034105.1-201ENST00000563488 319 ntBASIC18■□□□□ 0.47
UBA3Q8TBC4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18■□□□□ 0.47
UBA3Q8TBC4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
UBA3Q8TBC4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18■□□□□ 0.47
UBA3Q8TBC4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 AC105020.1-201ENST00000435356 2205 ntBASIC18■□□□□ 0.47
UBA3Q8TBC4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18■□□□□ 0.47
UBA3Q8TBC4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18■□□□□ 0.47
UBA3Q8TBC4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
UBA3Q8TBC4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms