Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 AC124067.4-201ENST00000519691 2379 ntBASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 PCDHA12-202ENST00000613593 2588 ntBASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM48Q8IWZ4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 AC002347.1-201ENST00000569543 541 ntBASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 AC008894.3-201ENST00000624324 3103 ntBASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM48Q8IWZ4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 AL139384.1-201ENST00000612143 3047 ntBASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms