Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 AL391256.1-201ENST00000443260 1855 ntBASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 MRPL3P1-201ENST00000400109 1033 ntBASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 AL160237.2-201ENST00000556165 472 ntBASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 AC105339.3-201ENST00000560043 636 ntBASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 AL356488.2-201ENST00000602755 427 ntBASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 REXO1L3P-201ENST00000622202 1288 ntBASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSL3PQ5NE16 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 LINC00895-201ENST00000629028 1637 ntBASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 AP002490.2-201ENST00000524791 560 ntBASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 TOP3BP1-201ENST00000420768 1380 ntBASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSL3PQ5NE16 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 RNA5SP419-201ENST00000515908 135 ntBASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 AC008667.4-201ENST00000607370 168 ntBASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 AL773604.1-201ENST00000617417 272 ntBASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CTSL3PQ5NE16 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms