Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
LINC00315P59091 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
LINC00315P59091 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC00315P59091 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 DUX4L17-201ENST00000557360 1267 ntBASIC12.27□□□□□ -0.45
LINC00315P59091 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
LINC00315P59091 AL592071.1-201ENST00000611956 408 ntBASIC12.27□□□□□ -0.45
LINC00315P59091 AD001527.2-201ENST00000622994 785 ntBASIC12.27□□□□□ -0.45
LINC00315P59091 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC00315P59091 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00315P59091 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00315P59091 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
LINC00315P59091 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00315P59091 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LINC00315P59091 AC003669.1-201ENST00000334569 611 ntBASIC12.26□□□□□ -0.45
LINC00315P59091 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00315P59091 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 VENTXP7-201ENST00000475503 772 ntBASIC12.26□□□□□ -0.45
LINC00315P59091 AC104819.1-201ENST00000504587 486 ntBASIC12.26□□□□□ -0.45
LINC00315P59091 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00315P59091 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00315P59091 AC012615.1-201ENST00000565797 1299 ntBASIC12.26□□□□□ -0.45
LINC00315P59091 Z69720.1-201ENST00000601483 472 ntBASIC12.26□□□□□ -0.45
LINC00315P59091 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00315P59091 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 AC124864.1-201ENST00000623408 392 ntBASIC12.26□□□□□ -0.45
LINC00315P59091 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00315P59091 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00315P59091 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00315P59091 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00315P59091 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00315P59091 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00315P59091 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms