Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CACNB3P54284 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.05■□□□□ 0.8
CACNB3P54284 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB3P54284 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CACNB3P54284 HTR7P1-202ENST00000624664 4411 ntBASIC20.05■□□□□ 0.8
CACNB3P54284 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.05■□□□□ 0.8
CACNB3P54284 AC131009.4-201ENST00000624048 1740 ntBASIC20.05■□□□□ 0.8
CACNB3P54284 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.05■□□□□ 0.8
CACNB3P54284 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNB3P54284 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.04■□□□□ 0.8
CACNB3P54284 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNB3P54284 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNB3P54284 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 AC015922.1-201ENST00000421102 1152 ntBASIC20.04■□□□□ 0.8
CACNB3P54284 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.04■□□□□ 0.8
CACNB3P54284 MPDU1-223ENST00000582151 728 ntBASIC20.04■□□□□ 0.8
CACNB3P54284 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.04■□□□□ 0.8
CACNB3P54284 AC008267.7-201ENST00000624570 1194 ntBASIC20.04■□□□□ 0.8
CACNB3P54284 NOC2LP1-202ENST00000452600 2235 ntBASIC20.04■□□□□ 0.8
CACNB3P54284 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNB3P54284 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.04■□□□□ 0.8
CACNB3P54284 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNB3P54284 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CACNB3P54284 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CACNB3P54284 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNB3P54284 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.04■□□□□ 0.8
CACNB3P54284 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CACNB3P54284 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.03■□□□□ 0.8
CACNB3P54284 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CACNB3P54284 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNB3P54284 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 FRMD8P1-201ENST00000440433 1524 ntBASIC20.03■□□□□ 0.8
CACNB3P54284 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNB3P54284 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CACNB3P54284 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CACNB3P54284 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.03■□□□□ 0.8
CACNB3P54284 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.03■□□□□ 0.8
CACNB3P54284 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNB3P54284 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNB3P54284 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.03■□□□□ 0.8
CACNB3P54284 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.03■□□□□ 0.8
CACNB3P54284 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CACNB3P54284 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.03■□□□□ 0.8
CACNB3P54284 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CACNB3P54284 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CACNB3P54284 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNB3P54284 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CACNB3P54284 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNB3P54284 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.03■□□□□ 0.8
CACNB3P54284 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNB3P54284 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNB3P54284 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNB3P54284 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.02■□□□□ 0.8
CACNB3P54284 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNB3P54284 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CACNB3P54284 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 MIR346-201ENST00000362234 95 ntBASIC20.02■□□□□ 0.8
CACNB3P54284 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNB3P54284 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CACNB3P54284 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.02■□□□□ 0.8
CACNB3P54284 AC097493.3-201ENST00000509725 367 ntBASIC20.02■□□□□ 0.8
CACNB3P54284 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.02■□□□□ 0.8
CACNB3P54284 MIR4453-201ENST00000584019 89 ntBASIC20.02■□□□□ 0.8
CACNB3P54284 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNB3P54284 AF228730.6-201ENST00000641497 218 ntBASIC20.02■□□□□ 0.8
CACNB3P54284 AC084121.3-201ENST00000641716 218 ntBASIC20.02■□□□□ 0.8
CACNB3P54284 AC105233.6-201ENST00000642093 218 ntBASIC20.02■□□□□ 0.8
CACNB3P54284 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CACNB3P54284 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNB3P54284 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms