Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC34P49427 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CDC34P49427 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC34P49427 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CDC34P49427 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CDC34P49427 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CDC34P49427 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
CDC34P49427 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.5□□□□□ -0.25
CDC34P49427 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.5□□□□□ -0.25
CDC34P49427 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CDC34P49427 TSPY12P-201ENST00000421279 868 ntBASIC13.5□□□□□ -0.25
CDC34P49427 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.5□□□□□ -0.25
CDC34P49427 AC009947.2-201ENST00000444014 672 ntBASIC13.5□□□□□ -0.25
CDC34P49427 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC34P49427 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.5□□□□□ -0.25
CDC34P49427 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC34P49427 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.5□□□□□ -0.25
CDC34P49427 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.5□□□□□ -0.25
CDC34P49427 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.5□□□□□ -0.25
CDC34P49427 AC010653.2-201ENST00000623505 997 ntBASIC13.5□□□□□ -0.25
CDC34P49427 AL157888.1-201ENST00000631930 593 ntBASIC13.5□□□□□ -0.25
CDC34P49427 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.5□□□□□ -0.25
CDC34P49427 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CDC34P49427 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC34P49427 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC34P49427 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC34P49427 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CDC34P49427 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDC34P49427 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC34P49427 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDC34P49427 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC34P49427 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC34P49427 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 KRT18P6-201ENST00000555540 1265 ntBASIC13.49□□□□□ -0.25
CDC34P49427 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CDC34P49427 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDC34P49427 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC34P49427 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDC34P49427 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CDC34P49427 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC34P49427 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms