Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.99□□□□□ -0.01
ATF1P18846 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.99□□□□□ -0.01
ATF1P18846 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
ATF1P18846 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 EGFEM1P-202ENST00000431685 1563 ntBASIC14.99□□□□□ -0.01
ATF1P18846 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.99□□□□□ -0.01
ATF1P18846 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ATF1P18846 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ATF1P18846 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.99□□□□□ -0.01
ATF1P18846 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
ATF1P18846 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.99□□□□□ -0.01
ATF1P18846 AC111152.3-201ENST00000569699 673 ntBASIC14.99□□□□□ -0.01
ATF1P18846 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.99□□□□□ -0.01
ATF1P18846 AL592071.1-201ENST00000611956 408 ntBASIC14.99□□□□□ -0.01
ATF1P18846 IGHV3-41-201ENST00000613121 348 ntBASIC14.99□□□□□ -0.01
ATF1P18846 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.99□□□□□ -0.01
ATF1P18846 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.99□□□□□ -0.01
ATF1P18846 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.99□□□□□ -0.01
ATF1P18846 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.99□□□□□ -0.01
ATF1P18846 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.99□□□□□ -0.01
ATF1P18846 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.99□□□□□ -0.01
ATF1P18846 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATF1P18846 AL513477.1-201ENST00000602865 2407 ntBASIC14.98□□□□□ -0.01
ATF1P18846 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.98□□□□□ -0.01
ATF1P18846 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ATF1P18846 AC103564.2-201ENST00000432853 1299 ntBASIC14.98□□□□□ -0.01
ATF1P18846 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.98□□□□□ -0.01
ATF1P18846 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.98□□□□□ -0.01
ATF1P18846 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.98□□□□□ -0.01
ATF1P18846 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 AC011840.4-201ENST00000578471 627 ntBASIC14.98□□□□□ -0.01
ATF1P18846 AC090616.6-201ENST00000582640 721 ntBASIC14.98□□□□□ -0.01
ATF1P18846 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.98□□□□□ -0.01
ATF1P18846 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.98□□□□□ -0.01
ATF1P18846 AL353801.3-201ENST00000609898 542 ntBASIC14.98□□□□□ -0.01
ATF1P18846 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ATF1P18846 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.98□□□□□ -0.01
ATF1P18846 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.98□□□□□ -0.01
ATF1P18846 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ATF1P18846 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.98□□□□□ -0.01
ATF1P18846 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ATF1P18846 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATF1P18846 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ATF1P18846 AL365203.3-201ENST00000609742 2057 ntBASIC14.97□□□□□ -0.01
ATF1P18846 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ATF1P18846 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ATF1P18846 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.97□□□□□ -0.01
ATF1P18846 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms