Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV3-43DP0DP04 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV3-43DP0DP04 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV3-43DP0DP04 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
IGHV3-43DP0DP04 AC097637.2-201ENST00000624096 1997 ntBASIC14.2□□□□□ -0.14
IGHV3-43DP0DP04 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV3-43DP0DP04 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGHV3-43DP0DP04 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 SPDYE21P-201ENST00000413323 827 ntBASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 AC132008.2-207ENST00000454517 770 ntBASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IGHV3-43DP0DP04 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 NUS1P1-201ENST00000446295 882 ntBASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 AP001269.4-201ENST00000609611 512 ntBASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 GPR89P-201ENST00000407924 1495 ntBASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
IGHV3-43DP0DP04 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
IGHV3-43DP0DP04 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms