Protein–RNA interactions for Protein: P0DP02

IGHV3-30-3, Immunoglobulin heavy variable 3-30-3, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-3P0DP02 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 PCDHB17P-201ENST00000539533 2393 ntBASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
IGHV3-30-3P0DP02 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 AC005915.1-201ENST00000624912 2018 ntBASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 HCG4P8-203ENST00000443049 980 ntBASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 AC104819.1-201ENST00000504587 486 ntBASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 TPSP2-201ENST00000561760 610 ntBASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
IGHV3-30-3P0DP02 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 AC026691.1-201ENST00000602502 2017 ntBASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 AC233702.3-201ENST00000578656 1387 ntBASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 AC091607.1-201ENST00000490318 1060 ntBASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.11□□□□□ -0.47
IGHV3-30-3P0DP02 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms