Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 TREX2-204ENST00000370212 861 ntTSL 5 BASIC11.49□□□□□ -0.57
SNCGO76070 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SNCGO76070 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 SERPINH1P1-201ENST00000419794 1249 ntBASIC11.49□□□□□ -0.57
SNCGO76070 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC11.49□□□□□ -0.57
SNCGO76070 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 PLLP-204ENST00000569059 665 ntTSL 3 BASIC11.49□□□□□ -0.57
SNCGO76070 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
SNCGO76070 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC11.49□□□□□ -0.57
SNCGO76070 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 AC116407.2-201ENST00000613639 860 ntBASIC11.49□□□□□ -0.57
SNCGO76070 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
SNCGO76070 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SNCGO76070 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
SNCGO76070 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC11.49□□□□□ -0.57
SNCGO76070 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SNCGO76070 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 AL355312.1-201ENST00000407115 2176 ntBASIC11.48□□□□□ -0.57
SNCGO76070 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 AC139749.1-202ENST00000617529 3139 ntBASIC11.48□□□□□ -0.57
SNCGO76070 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC11.48□□□□□ -0.57
SNCGO76070 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC11.48□□□□□ -0.57
SNCGO76070 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SNCGO76070 CFL2-205ENST00000555765 632 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 AC142381.2-201ENST00000566120 298 ntBASIC11.48□□□□□ -0.57
SNCGO76070 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC11.48□□□□□ -0.57
SNCGO76070 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC11.48□□□□□ -0.57
SNCGO76070 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
SNCGO76070 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SNCGO76070 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.48□□□□□ -0.57
SNCGO76070 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.48□□□□□ -0.57
SNCGO76070 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SNCGO76070 AC092171.3-201ENST00000610122 2651 ntBASIC11.48□□□□□ -0.57
SNCGO76070 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms