Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.34□□□□□ -0.27
ZNF253O75346 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ZNF253O75346 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ZNF253O75346 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
ZNF253O75346 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.34□□□□□ -0.27
ZNF253O75346 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF253O75346 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF253O75346 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
ZNF253O75346 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF253O75346 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF253O75346 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF253O75346 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
ZNF253O75346 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.33□□□□□ -0.27
ZNF253O75346 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF253O75346 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ZNF253O75346 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF253O75346 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.33□□□□□ -0.28
ZNF253O75346 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF253O75346 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
ZNF253O75346 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF253O75346 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF253O75346 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.33□□□□□ -0.28
ZNF253O75346 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 MTCL1P1-201ENST00000446207 792 ntBASIC13.33□□□□□ -0.28
ZNF253O75346 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.33□□□□□ -0.28
ZNF253O75346 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ZNF253O75346 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF253O75346 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.33□□□□□ -0.28
ZNF253O75346 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.33□□□□□ -0.28
ZNF253O75346 AC145285.6-201ENST00000604632 637 ntBASIC13.33□□□□□ -0.28
ZNF253O75346 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ZNF253O75346 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ZNF253O75346 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF253O75346 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.33□□□□□ -0.28
ZNF253O75346 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF253O75346 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ZNF253O75346 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ZNF253O75346 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.32□□□□□ -0.28
ZNF253O75346 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 AC105917.1-201ENST00000506637 2539 ntBASIC13.32□□□□□ -0.28
ZNF253O75346 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ZNF253O75346 TSPY15P-201ENST00000457163 923 ntBASIC13.32□□□□□ -0.28
ZNF253O75346 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 COX11P1-201ENST00000489116 835 ntBASIC13.32□□□□□ -0.28
ZNF253O75346 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms