Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SGCEO43556 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.12■□□□□ 0.01
SGCEO43556 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.12■□□□□ 0.01
SGCEO43556 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.12■□□□□ 0.01
SGCEO43556 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SGCEO43556 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.12■□□□□ 0.01
SGCEO43556 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.12■□□□□ 0.01
SGCEO43556 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.12■□□□□ 0.01
SGCEO43556 KRT18P31-201ENST00000506277 1292 ntBASIC15.12■□□□□ 0.01
SGCEO43556 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.12■□□□□ 0.01
SGCEO43556 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.12■□□□□ 0.01
SGCEO43556 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.12■□□□□ 0.01
SGCEO43556 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.12■□□□□ 0.01
SGCEO43556 AC091304.2-201ENST00000564639 760 ntBASIC15.12■□□□□ 0.01
SGCEO43556 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.12■□□□□ 0.01
SGCEO43556 LINC01711-201ENST00000598340 967 ntBASIC15.12■□□□□ 0.01
SGCEO43556 AP001269.4-201ENST00000609611 512 ntBASIC15.12■□□□□ 0.01
SGCEO43556 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.12■□□□□ 0.01
SGCEO43556 AC079776.2-201ENST00000641154 1609 ntBASIC15.12■□□□□ 0.01
SGCEO43556 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.12■□□□□ 0.01
SGCEO43556 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.12■□□□□ 0.01
SGCEO43556 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.12■□□□□ 0.01
SGCEO43556 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.12■□□□□ 0.01
SGCEO43556 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SGCEO43556 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 EGFEM1P-202ENST00000431685 1563 ntBASIC15.11■□□□□ 0.01
SGCEO43556 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SGCEO43556 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 AL121761.2-201ENST00000598007 1648 ntBASIC15.11■□□□□ 0.01
SGCEO43556 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 RBM17P3-201ENST00000417687 1192 ntBASIC15.11■□□□□ 0.01
SGCEO43556 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.11■□□□□ 0.01
SGCEO43556 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.11■□□□□ 0.01
SGCEO43556 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 AC073592.4-201ENST00000623827 446 ntBASIC15.11■□□□□ 0.01
SGCEO43556 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SGCEO43556 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SGCEO43556 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
SGCEO43556 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.11■□□□□ 0.01
SGCEO43556 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SGCEO43556 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SGCEO43556 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SGCEO43556 FLJ38576-201ENST00000623820 2459 ntBASIC15.1■□□□□ 0.01
SGCEO43556 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SGCEO43556 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
SGCEO43556 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
SGCEO43556 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.1■□□□□ 0.01
SGCEO43556 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms